I personally don't like the new system (going with my experience with the shared storage system); I find it much easier to see everything all at once and be able to place items where I want them, not use filters and scroll bars.
But, they say there is no going back, so this might help:
With the idea of having multiple chests within the vault (the example I saw was chest 1 to 10), how about giving us the ability to rename those chests. It would make it much easier for us to know that crafting items are in *craftitems* chest instead of chest 6.
Just a thought, I'm sure that kind of programing would be too complicated